Showing : statistical power • reset
4
votes
5
replies
2.5k
views
sample size determination in microarrays studies with limma analysis
limma sample size microarrays statistical power
6.6 years ago eleonoregravier ▴ 70
2
votes
4
replies
1.3k
views
design microarrays limma
limma statistical power design variability microarray
updated 7.1 years ago by ★ 28k • written 7.1 years ago by • 0
3
votes
3
replies
1.8k
views
csaw: how does unequal sample size affect filtering filterWindows step
csaw differential binding analysis sample size independent filtering statistical power
updated 7.2 years ago by ★ 28k • written 7.2 years ago by • 0
2
votes
3
replies
17k
views
Removing genes with very low counts in all samples before run DESeq
deseq2 statistical power independent filtering
10.0 years ago alejandro.colaneri ▴ 20
4 results • Page 1 of 1
Recent ...
Replies
Comment: [How to construct a model.matrix ] by kyj2226 • 0
Thanks to you, I learn a lot. Many thanks, Yujin.
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0
thank you for your advice, I posted separate post.
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by Robert Castelo ★ 3.4k
Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…
Answer: DESeq2 rerun returns different results by ATpoint ★ 4.5k
DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…
Answer: [How to construct a model.matrix ] by Gordon Smyth 51k
> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…
Votes
Answer: [How to construct a model.matrix ]
C: DESeq2 baseMean values for each sample
C: DESeq2 baseMean values for each sample
Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta
A: Some questions for remove batch effect by using mnnCorrect
Awards • All
Popular Question to prabin.dm • 0
Popular Question to Robert Castelo ★ 3.4k
Popular Question to Michael Stadler ▴ 350
Scholar to ATpoint ★ 4.5k
Commentator to James W. MacDonald 67k
Locations • All
South Korea, 32 minutes ago
Australia, 52 minutes ago
The city by the bay, 1 hour ago
United Kingdom, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
Traffic: 504 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6